Popular repositories Loading

1. Anelloflow Anelloflow Public

   Bioinformatics pipeline for detecting anelloviruses present in samples using our metagenomic RCA ONT protocol

   Shell 2

2. Antiviral-Antibody-Epitope-Selection-is-a-Heritable-Trait Antiviral-Antibody-Epitope-Selection-is-a-Heritable-Trait Public

   Antiviral Antibody Epitope Selection is a Heritable Trait

   R 1 1

3. ONT-RCA-error-profiler ONT-RCA-error-profiler Public

   Tool for quantifying base-level error rates (SNVs, insertions, deletions, softclips) in Oxford Nanopore sequencing of RCA-amplified circular genomes, with support for depth simulation, virome backg…

   Python

4. ONT_NCBI_contamination ONT_NCBI_contamination Public

   Python 1

5. raoQ-viral-diversity-PSB2026 raoQ-viral-diversity-PSB2026 Public

   Code and data supporting the PSB 2025 poster on benchmarking Rao’s Q as a quantitative, evolution-aware metric of viral α-diversity in metagenomic datasets.

6. Anellome_pipeline Anellome_pipeline Public

   Shell