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Pull requests: nextflow-io/nextflow

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Pull requests list

Fix AWS Batch task polling forever when the job is missing from the DescribeJobs response
#7302 opened Jul 3, 2026 by item084 Loading…
1
1
Revert the stream swap after the redirect to .command.out and .command.err
#7300 opened Jul 3, 2026 by tcezard Loading…
1
1
chore: update dependency ch.qos.logback:logback-core to v1.5.33 [security] renovate-security
#7297 opened Jul 3, 2026 by seqeralabs-renovate Bot Loading…
1 task
1
Add graceful fallback for array directive with unsupported executors
#7296 opened Jul 2, 2026 by bentsherman Member Loading…
1
2
Round up CPUs to nearest valid value for AWS Batch Fargate executor/aws-batch
#7295 opened Jul 2, 2026 by bentsherman Member Loading…
1
1
Exclude null config env entries from task environment error-improvements
#7294 opened Jul 2, 2026 by bentsherman Member Loading…
1
2
Add support for latest-generation Google Cloud machine families (#6841) executor/google-batch
#7293 opened Jul 2, 2026 by bentsherman Member Loading…
1
Add support for latest-generation Google Cloud machine families (#6841) executor/google-batch
#7292 opened Jul 2, 2026 by bentsherman Member Loading…
1
Document exit logic in task wrapper script software/bash
#7290 opened Jul 1, 2026 by bentsherman Member Loading…
1
1
Add docker.cpuLimits config option software/docker
#7289 opened Jul 1, 2026 by bentsherman Member Loading…
1
2
Fix containerOptions --opt=value parsing for AWS Batch (#5190) executor/aws-batch
#7288 opened Jul 1, 2026 by bentsherman Member Loading…
1
1
Show absolute path in missing main script error software/git
#7286 opened Jul 1, 2026 by bentsherman Member Loading…
1
1
Force-create staged input symlinks to allow task re-runs software/bash
#7285 opened Jul 1, 2026 by bentsherman Member Loading…
1
1
Improve Nextflow resilience to eventually consistent FileSystems executor/k8s
#7281 opened Jul 1, 2026 by BioWilko Contributor • Draft
1
1
Fall back to scheduler API exit code when .exitcode file is unavailable
#7273 opened Jun 30, 2026 by jordeu Collaborator Loading…
3
docs: Move Static Typing pages to dedicated section docs
#7270 opened Jun 30, 2026 by christopher-hakkaart Collaborator Loading…
1
ADR: Module Parameters and Tool Arguments
#7260 opened Jun 25, 2026 by pditommaso Member Loading…
9
Add ephemeral OS disk support to Azure Batch pools executor/azure-batch
#7259 opened Jun 25, 2026 by adamrtalbot Collaborator • Draft
4
Fix v2 config parser dropping profiles from earlier config files (25.10.x)
#7249 opened Jun 22, 2026 by robsyme Collaborator Loading…
1
Claude Code hooks (5/5): integration test runner
#7244 opened Jun 18, 2026 by edmundmiller Member Loading…
Claude Code hooks (4/4): IntelliJ IDEA formatter
#7243 opened Jun 18, 2026 by edmundmiller Member Loading…
Claude Code hooks (3/4): test runner
#7242 opened Jun 18, 2026 by edmundmiller Member Loading…
Claude Code hooks (2/4): build check on Stop
#7241 opened Jun 18, 2026 by edmundmiller Member Loading…
Claude Code hooks (1/4): EditorConfig formatting
#7240 opened Jun 18, 2026 by edmundmiller Member Loading…
1
ADR: Process error: section
#7233 opened Jun 15, 2026 by bentsherman Member Loading…
4
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